• Research
    • 2021
    1. Kang DY, Park JA, Kim WJ, Kim SJ, Lee HR, Kim WJ, Yoo JY, Jung SJ. All-Inkjet-Printed 3D Alveolar Barrier Model with Physiologically Relevant Microarchitecture. Advanced Science. 2021 March 08

    https://onlinelibrary.wiley.com/doi/10.1002/advs.202004990


    2. Arwa Abdulla Baabdulla, Hesung Now, Ju An Park, Woo-Jong Kim, Sungjune Jung, Joo-Yeon Yoo, Thomas Hillen. Homogenization of a reaction diffusion equation can explain influenza A virus load data. J Theor Biol. 2021 Jun 20

    Homogenization of a reaction diffusion equation can explain influenza A virus load data - ScienceDirect

    3. Jee-Eun Lee, Nari Kim, Minkyo Jung, Ji-Young Mun, Joo-Yeon Yoo. SHISA5/SCOTIN restrains spontaneous autophagy induction by blocking contact between the ERES and phagophores. Autophagy.2021. Oct 31

    SHISA5/SCOTIN restrains spontaneous autophagy induction by blocking contact between the ERES and phagophores

    4. JYoonji Jung, Murat Artan, Nari Kim, Jeonghun Yeom, Ara B Hwang, Dae-Eun Jeong, Özlem Altintas, Keunhee Seo, Mihwa Seo, Dongyeop Lee, Wooseon Hwang, Yujin Lee, Jooyeon Sohn, Eun Ji E Kim, Sungeun Ju, Seong Kyu Han, Hyun-Jun Nam, Linnea Adams, Youngjae Ryu, Dong Jin Moon, Chanhee Kang, Joo-Yeon Yoo, Sang Ki Park, Chang Man Ha, Malene Hansen, Sanguk Kim, Cheolju Lee, Seung-Yeol Park, Seung-Jae V Lee. MON-2, a Golgi protein, mediates autophagy-dependent longevity in Caenorhabditis elegans. Science advances. 2021 Dec 3

    MON-2, a Golgi protein, mediates autophagy-dependent longevity in Caenorhabditis elegans

    2020
    1. Jeong DE, Lee Y, Ham S, Lee D, Kwon S, Park HH, Hwang SY, Yoo JY, Roh TY, Lee SV. Inhibition of the oligosaccharyl transferase in Caenorhabditis elegans that compromises ER proteostasis suppresses p38-dependent protection against pathogenic bacteria. PLoS Genet. 16(3):e1008617. 2020 Mar 4

    https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1008617
    2. Seo JH, Hwang CS, Yoo JY. MTFMT deficiency correlates with reduced mitochondrial integrity and enhanced host susceptibility to intracellular infection. Sci Rep. 10(1):11183. 2020 Jul 7 Link

    https://www.nature.com/articles/s41598-020-68053-8
    2019
    1. An SWA, Choi ES,Hwang W,Son HG, Yang JS, Seo K, Nam HJ, Nguyen NTH, Kim EJE, Suh BK, Kim Y, Nakano S, Ryu Y, Man Ha C, Mori I, Park SK, Yoo JY, Kim S, Lee SV. KIN-4/MAST kinase promotes PTEN-mediated longevity of Caenorhabditiselegans via binding through a PDZ domain.Aging Cell. 2019 Feb 17

    https://onlinelibrary.wiley.com/doi/full/10.1111/acel.12906
    2. Kim WJ, Hur KY, Park HW, Lee SW, Yoo JY. Pathogenicity of the H1N1 influenza virus enhanced by functional synergy between the NPV100I and NAD248N pair. PLoS One. 2019 May 31;14(5)

    https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0217691
    3. Ahn N, Kim WJ, Kim N, Park HW, Lee SW, Yoo JY. The Interferon-Inducible Proteoglycan Testican-2/SPOCK2 Functions as a Protective Barrier against Virus Infection of Lung Epithelial Cells. J Virol. 2019 Jul 24.

    https://jvi.asm.org/content/early/2019/07/18/JVI.00662-19.long
    2018
    1. Lee JW, Bae E, Kwon SH, Yu MY, Cha RH, Lee H, Kim DK, Lee JP, Ye SK, Yoo JY, Park DJ, Kim YS, Yang SH. Transcriptional modulation of the T helper 17/interleukin 17 axis ameliorates renal ischemia-reperfusion injury. Nephrol Dial Transplant. 2018 Dec 12.

    https://academic.oup.com/ndt/advance-article/doi/10.1093/ndt/gfy370/5240953
    2. Kim JM, Seok OH, Ju S, Heo JE, Yeom J, Kim DS, Yoo JY, Varshavsky A, Lee C , Hwang CS. Formyl-methionine as an N-degron of a eukaryotic N-end rule pathway. Science, 362(6418), 2018 Nov 30.

    http://science.sciencemag.org/content/362/6418/eaat0174.long
    2017
    1. Jeong, DE, Lee, D, Hwang, SY, Lee, Y, Lee, JE, Seo, M, Hwang, W, Seo, K, Hwang, AB, Artan, M, Son, HG, Jo, JH, Baek, H, Oh, YM, Ryu, Y, Kim, HJ, Ha, CM, Yoo, JY*, Lee, SV*. Mitochondrial chaperone HSP-60 regulates anti-bacterial immunity via p38 MAP kinase signaling. The EMBO Journal, 36, 1046-1065, 2017 (* co-corresponding).

    http://emboj.embopress.org/content/36/8/1046.long
    2. Doğanay, S, Lee, MY, Baum, A, Peh, J, Hwang, SY, Yoo, JY, Hergenrother, PJ, García-Sastre, A, Myong, S, Ha, T. Single-cell analysis of early antiviral gene expression reveals a determinant of stochastic IFNB1 expression. Integr Biol (Camb), 2017

    http://pubs.rsc.org/en/Content/ArticleLanding/2017/IB/C7IB00146K#!divAbstract
    3. Park, JA, Yoon, S, Kwon, J, Now, H, Kim, YK, Kim, WJ, Yoo, JY, Jung, S. Freeform micropatterning of living cells into cell culture medium using direct inkjet printing. Scientific Reports,,7:14610, 2017

    http://www.nature.com/articles/s41598-017-14726-w
    2016
    1. Kim, N., Kim, MJ., Sung, PS., Bae, YC., Shin, EC., Yoo, JY. Interferon-inducible protein SCOTIN interferes with HCV replication through the autolysosomal degradation of NS5A. Nature Communication, 7: 10631, 2016.

    https://www.nature.com/articles/ncomms10631?WT.ec_id=NCOMMS-20160217&spMailingID=50715003&spUserID=ODkwMTM2NjQyNgS2&spJobID=862105978&spReportId=ODYyMTA1OTc4S0#results
    2. Nguyen, NT, Now, H., Kim, WJ., Kim, N., Yoo, JY. Ubiquitin-like modifier FAT10 attenuates RIG-I mediated antiviral signaling by segregating activated RIG-I from its signaling platform. Scientific Reports, 6:23377, 2016.

    https://www.nature.com/articles/srep23377
    3. Now, H, Yoo, JY. AG490 and PF431396 Sensitive Tyrosine Kinase Control the Population Heterogeneity of Basal STAT1 Activity in Ube1l Deficient Cells. PLoS ONE, 11(7): e0159453, 2016.

    http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0159453
    4. Kim, N, Now, H, Nguyen, NT, Yoo, JY. Multilayered regulations of RIG-I in the anti-viral signaling pathway. J Microbiol, 54(9):583-587, 2016.

    https://link.springer.com/article/10.1007%2Fs12275-016-6322-2
    2015
    1. Sun, HY., Kim N., Hwang, CS., Yoo, JY. Protein Degradation of RNA Polymerase II-Association Factor 1 (PAF1) Is Controlled by CNOT4 and 26S Proteasome. PLoS One, 10(5): e0125599, 2015.

    http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0125599
    2. Jang, MA, Kim, EK, Now, H, Nguyen, NT, Kim, WJ, Yoo, JY, Lee, J, Jeong, YM, Kim, CH, Kim, OH, Sohn, S, Nam, SH, Hong, Y, Lee, YS, Chang, SA, Jang, SY, Kim, JW, Lee, MS, Lim, SY, Sung, KS, Park, KT, Kim, BJ, Lee, JH, Kim, DK, Kee, C, Ki, CS. Mutations in DDX58, which Encodes RIG-I, Cause Atypical Singleton-Merten Syndrome. Am J Hum Genet, 96, 266-74, 2015

    http://www.sciencedirect.com/science/article/pii/S0002929714005072?via%3Dihub
    2014
    1. Yoo, HS., Choi, Y., Ahn, N., Lee, S., Kim, WU., Jang, MS., Jang, MH., Kim, YS., Yoo, JY. Transcriptional Regulator CTR9 Inhibits Th17 Differentiation via Repression of IL-17 Expression. J Immunol, 192(4): 1440-1448, 2014.

    http://www.jimmunol.org/content/192/4/1440.long
    2. Choi, Y., Kim, JK, Yoo, JY. NFkB and STAT3 synergistically activate the expression of FAT10, a gene counteracting the tumor suppressor p53. Molecular Oncology, 8, 642-655, 2014.

    http://www.sciencedirect.com/science/article/pii/S1574789114000192
    3. Jo, JH., Chung, TM., Youn, H., Yoo, JY. Cytoplasmic parafibromin targets and destabilizes p53 mRNA to control p53 mediated apoptosis. Nature Communications, 5(5433), 2014.

    https://www.nature.com/articles/ncomms6433
    2013
    1. Hwang, SY., Hur, KY., Kim, JR., Cho, KH., Kim, SH., Yoo, JY. Biphasic RLR-IFN-βResponse Controls the Balance between Antiviral Immunity and Cell Damage. J Immunol, 190(3): 1192-1200, 2013.

    http://www.jimmunol.org/content/early/2013/01/02/jimmunol.1202326
    2. Kim, N., Sun, HY., Youn, MY., Yoo, JY. IL-1β-specific recruitment of GCN5 histone acetyltransferase induces the release of PAF1 from chromatin for the de-repression of inflammatory response genes. Nucleic Acid Research, 41(8): 4495-4506, 2013.

    http://nar.oxfordjournals.org/content/41/8/4495.long
    3. Yoo, HS., Seo, JH., Yoo, JY. CTR9, a component of PAF complex, controls elongation block at the c-Fos locus via signal-dependent regulation of chromatin-bound NELF dissociation. PLoS One, 8(4):e61055, 2013

    http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0061055
    4. Hur, KY., Moon, JY., Kim, SH., Yoo, JY. Model-Based Simulation and Prediction of an Antiviral Strategy against Influenza A Infection. PLoS One, 8(7):e68235, 2013.

    http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0068235
    2012
    1. Hwang, SY., Sun, HY., Lee, KH., Oh, BH., Cha, Y, J., Kim, B, H., Yoo, JY. 5’-Triphosphate-RNA-independent Activation of RIG-I via RNA Aptamer with Enhanced Antiviral Activity. Nucleic Acid Research, 40(6):2724-2733, 2012.

    http://nar.oxfordjournals.org/content/early/2011/11/29/nar.gkr1098.long
    2. Oh, YM., Kim, JK., Choi, S., Yoo, JY. Identification of co-occurring transcription factor binding sites from DNA sequence using clustered position weight matrices. Nucleic Acid Research, 40(5):e38, 2012.

    http://nar.oxfordjournals.org/content/early/2011/12/19/nar.gkr1252.full?sid=4659eeb5-7c22-464e-8543-9ca0eed79448
    2011
    1. Now, H., Yoo, JY. A protein-kinase, IFN-inducible double-stranded RNA dependent inhibitor and repressor of p58 (PRKRIR) enhances type I IFN-mediated antiviral response through the stability control of RIG-I protein. Biochem Biophys Res Commun, 413(3): 487-493, 2011.

    http://www.sciencedirect.com/science/article/pii/S0006291X11015464
    2010
    1. Kim, MJ., Yoo, JY. Inhibition of Hepatitis C Virus by IFN-Mediated ISGylayion of HCV-NS5A. J Immunol, 185(7): 4311-4318, 2010.

    http://www.jimmunol.org/content/185/7/4311.long
    2009
    1. Oh, YM., Kim, JK., Choi, Y., Choi, S., Yoo, JY. Prediction and Experimental Validation of Novel STAT3 Target Genes in Human Cancer Cells. PLoS ONE, 4(9): e6911, 2009.

    http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0006911
    2008
    1. Kim, MJ., Yoo, JY. Active caspase-1-mediated secretion of retinoic acid inducible gene-I. J Immunol, 181(10):7324-7331, 2008.

    http://www.jimmunol.org/content/181/10/7324.long
    2. Kim, MJ., Hwang, SY., Imaizumi, T., Yoo, JY. Negative feedback regulation of RIG-I-mediated antiviral signaling by interferon-induced ISG15 conjugation. J Virol 82(3):1474-83, 2008.

    http://jvi.asm.org/content/82/3/1474.long
    2007
    1. Youn, MY., Yoo, HS., Kim, MJ., Hwang, SY, Choi, Y, Desiderio SV., Yoo JY. hCTR9, a component of Paf1 complex, participates in the transcription of interleukin 6-responsive genes through regulation of STAT3-DNA interactions. J Biol Chem 282(48):34727-34, 2007.

    http://www.jbc.org/content/282/48/34727.long